Biotechnology and Bioinformatics

Prof. Dr. Tiratha Raj Singh
Professor, Associate Dean (Innovation), Faculty In-charge, Media Relations
( 91) 01792-239344
tiratharaj.singh@juit.ac.in
For More Information Click here

Biography :

Dr. Tiratha Raj Singh is a senior academician, researcher, and administrator at Jaypee University of Information Technology (JUIT), Waknaghat, currently serving as Associate Dean (Innovation). He is a Professor in the Department of Biotechnology and Bioinformatics, and also holds the responsibilities of Media In-charge and Coordinator of the Centre of Healthcare Technologies and Informatics (CEHTI). He earned his PhD in Bioinformatics from MANIT, Bhopal, with joint doctoral research at Tel Aviv University, Israel, followed by a prestigious VATAT postdoctoral fellowship in Functional Genomics and Molecular Evolution at TAU.
Since joining JUIT in 2010, his research has focused on genomics, proteomics, systems biology, and AI-driven computational approaches to decode complex biological networks underlying DNA repair mechanisms, Alzheimer’s disease, and cancer. His lab actively mines large-scale genomic, transcriptomic, proteomic, and pathway datasets to identify disease mechanisms, propose novel therapeutic inhibitors, and develop biological databases, analytical tools, and web-based applications. Dr. Singh has led and contributed to several DST, ICMR, and DBT-funded projects, published extensively in leading international journals, supervised numerous undergraduate and postgraduate research projects, and guided eight PhD scholars to completion. His contributions have been recognized through international awards, an international patent, and prestigious research distinctions, reflecting his commitment to innovation-driven research, academic leadership, and translational impact.

Project Areas for Bachelor/Master Project work:
Bioinformatics, Computational Genomics and Computational Systems Biology.
DNA Repair Mechanisms and associated human malignancies.
Alzheimer's Disease and other Neurological disorders.
Data Mining, Machine Learning and Deep Learning applications for Biological data analysis.
Web based softwares/applications and database development for above mentioned topics.
Any other topic of relevance from Biomedical and Healthcare domains (falling under CEHTI).

Author Publication Profile:

Publication(s): Click Here to Add New Publication(s)
2025 (8)	2024 (12)	2023 (10)	2022 (10)	2021 (14)	2020 (6)
2019 (16)	2018 (13)	2017 (13)	2016 (9)	2015 (14)	2014 (16)
2013 (12)	2012 (6)	2011 (6)	2010 (1)	All

Book(s) :

Tiratha Raj Singh, Anju Sharma, Rohit Shukla, VS Bhardwaj (2023).Easy Way of Doing Bioinformatics: A Tool for Biological Data Analysis. Volume II..(1st) New Delhi : Indu Book Services Pvt. Ltd.. [ISBN : 9789391377861] []. Google Search
Tiratha Raj Singh, Anju Sharma, Rohit Shukla, VS Bhardwaj (2023).Easy Way of Doing Bioinformatics: A Tool for Biological Data Analysis. Volume I.(1st) New Delhi : Indu Book Services Pvt. Ltd.. [ISBN : 9789391377861] []. Google Search
Tiratha Raj Singh, Hemraj Saini, Moacyr Comar Junior (2023).Bioinformatics and Computational Biology: Technological Advancements, Applications and Opportunities.(1st) UK : CRC Press. [ISBN : 9781032361581] [SCOPUS ]. Google Search

Book Chapter(s) :

Aanya Parasher, Tiratha Raj Singh (2025). Systems Neuroscience. In Systems Biology and In-Depth Applications for Unlocking Diseases Ist, pp. 237-244 : Academic Press. [ISBN : 978-0-443-22326-6] [SCOPUS ]. Google Search
Adnan Raja, Rohit Shukla, Brigitte Vannier, Ahmed Moussa, Anil Kant Thakur, Tiratha Raj Singh (2025). Technologies, Computations, and Data Analysis for Next-Generation Sequencing. In Next-Generation Sequencing Standard Operating Procedures and Applications Ist, pp. - Boca Raton: CRC Press. [ISBN : 9781003354062] [SCOPUS ]. Google Search
Medhavi Pokhriyall, Nidhi Shukla, Tiratha Raj Singh, Prashanth Suravajhala (2024). Proteogenomic Approaches for Diseasome Studies. In Proteogenomics: Methods and Protocols Ist, pp. 253-264 New York: Springer. [ISBN : 978-1-0716-4152-1] [SCOPUS ]. Google Search
Ashwani Kumar, Navnit Kumar Mishra, Utkarsh Raj, Tiratha Raj Singh (2024). Sequence Based Algorithms in Bioinformatics. In In Bioinformatics and Computational Biology: Technological Advancements, Applications and Opportunities 1st, pp. 16-26 UK: CRC Press. [ISBN : 9781003331247] [SCOPUS ]. Google Search
Vinamrata Sharma, Saumya Tyagi, Tiratha Raj Singh (2024). Computational Molecular Evolution A Detailed View of Phylogenetic Methods. In Bioinformatics and Computational Biology: Technological Advancements, Applications and Opportunities Ist, pp. 299-313 UK: CRC. [ISBN : 9781003331247] [SCOPUS ]. Google Search
Arvind Kumar Yadav, Ajay Kumar, Ankita Singh, Anil Kant Thakur, Tiratha Raj Singh (2024). Microarray Data Analysis Methods and Applications. In Bioinformatics and Computational Biology: Technological Advancements, Applications and Opportunities Ist, pp. 162-173 UK: CRC. [ISBN : 9781003331247] [SCOPUS ]. Google Search
Tiratha Raj Singh, Prasanth Survajhala (2024). Fundamental and Best Practices for Protein Annotations. In Bioinformatics and Computational Biology: Technological Advancements, Applications and Opportunities Ist, pp. 155-161 UK: CRC. [ISBN : 9781003331247] [SCOPUS ]. Google Search
Saumya Tyagi, Vinamrata Sharma, Tiratha Raj Singh (2024). Design and Analysis of Algorithms in Computational Biology. In Bioinformatics and Computational Biology: Technological Advancements, Applications and Opportunities Ist, pp. 3-13 UK: CRC. [ISBN : 9781003331247] [SCOPUS ]. Google Search
Navnit Kumar Mishra, Ashwani Kumar, Utkarsh Raj, Tiratha Raj Singh (2024). Structure Based Algorithms in Bioinformatics. In Bioinformatics and Computational Biology: Technological Advancements, Applications and Opportunities Ist, pp. 27-38 UK: CRC. [ISBN : 9781003331247] [SCOPUS ]. Google Search
Ashwani Kumar, Navnit Kumar Mishra, Utkarsh Raj, Tiratha Raj Singh (2023). Sequence Based Algorithms in Bioinformatics. In Bioinformatics and Computational Biology: Technological Advancements, Applications and Opportunities Ist, pp. 16-26 UK: CRC. [ISBN : 9781003331247] [SCOPUS ]. Google Search
R Shukla, AK Yadav, WO Sote, MC Junior, Tiratha Raj Singh (2021). Systems Biology and Big Data Analytics. In Bioinformatics: Methods and Applications pp. 425-442 : Academic Press. [ISBN : 978-0-323-89775-4] []. Google Search
Arvind Kumar Yadav, Rohit Shukla, Tiratha Raj Singh (2021). Topological parameters, patterns, and motifs in biological networks. In Bioinformatics: Methods and Applications pp. 367-380 : Academic Press. [ISBN : 978-0-323-89775-4] []. Google Search
Arvind Kumar Yadav, Rohit Shukla, Tiratha Raj Singh (2021). Machine learning in expert systems for disease diagnostics in human healthcare, . In Intelligent Data-Centric Systems, Machine Learning, Big Data, and IoT for Medical Informatics, pp. 179-200 : Academic Press. [ISBN : 9780128217771] []. Google Search
Rohit Shikla, Arvind Kumar Yadav, Tiratha Raj Singh (2020). Application of Deep Learning in Biological Big Data Analysis. In Large-Scale Data Streaming, Processing, and Blockchain Security International, pp. 117-148 Hershey, USA: IGI Global, UK. [ISBN : 9781799834441|] []. Google Search
Manika Sehgal, Tiratha Raj Singh (2020). Principles and Analysis of Biological Networks: Biological Pathways and Network Motifs. . In Data Analytics in Medicine: Concepts, Methodologies, Tools, and Applications pp. 551-564 USA: IGI Blobal. [ISBN : ISBN13: 9781799812043] []. Google Search
Manika Sehgal, Tiratha Raj Singh (2020). Principles and Analysis of Biological Networks: Biological Pathways and Network Motifs. In Data Analytics in Medicine: Concepts, Methodologies, Tools, and Applications (4 Volumes) pp. 551-564 USA: IGI Global. [ISBN : 9781799812043] [SCOPUS ]. Google Search
Priya P. Panigrahi, Tiratha Raj Singh (2019). Data Mining, Big Data, Data Analytics: Big Data Analytics in Bioinformatics. In Web Services: Concepts, Methodologies, Tools, and Applications pp. 89-104 USA: IGI Global. [ISBN : 9781522575016] []. Google Search
Ankush Bansal, Tiratha Raj Singh (2019). Epigenome Wide DNA Methylation and Histone Modification of Alzheimers Disease. In Computational Epigenetics and Diseases pp. 131-148 : Academic Press. [ISBN : 978-0-12-814513-5] []. Google Search
Ankush Bansal, Siddhant Kalra, Babajan Banaganapalli, Tiratha Raj Singh (2019). Modeling and Optimization of Molecular Biosystems to Generate Predictive Models. In Essentials of Bioinformatics, Volume I: understanding bioinformatics: genes to proteins pp. 373-387 Switzerland : Springer, Cham. [ISBN : 978-3-030-02634-9] []. Google Search
Ankush Bansal, Mehul Salaria, Tiratha Raj Singh (2019). Tau Pathology: A Step Towards Understanding Neurodegenerative Disorders Network Complexity . In Handbook of Research on Critical Examinations of Neurodegenerative Disorders pp. 217-234 : IGI Global. [ISBN : 9781522552826] []. Google Search
Tiratha Raj Singh, Ankush Bansal (2018). Gene Duplication and Speciation. In Reference Module in Life Sciences Encyclopedia of Bioinformatics and Computational Biology, pp. 965-974 : Elsevier. [ISBN : 9780128114148] []. Google Search
Tiratha Raj Singh, Ankita Shukla, Bensellak Taoufik, Ahmed Moussa, Brigitte Vannier (2018). Disease Biomarker Discovery. In Reference Module in Life Sciences Encyclopedia of Bioinformatics and Computational Biology, pp. 476-488 : Elsevier. [ISBN : 9780128114148] []. Google Search
Ankita Shukla, Tiratha Raj Singh (2017). Computational Network Approaches and their Applications for Complex Diseases. In Translational Bioinformatics and Its Application International, pp. 337-352 Netherlands: Springer. [ISBN : 9789402410433] [SCOPUS ]. Google Search
Priya P Panigrahi, Tiratha Raj Singh (2017). Data Mining, Big Data, Data Analytics: Big Data Analytics in Bioinformatics. In Library and Information Services for Bioinformatics Education and Research pp. 91-111 : IGI Global. [ISBN : 9781522518716] []. Google Search
Tiratha Raj Singh, Brigitte Vannier, Ahmed Moussa (2016). Extraction of Differentially Expressed Genes in Microarray Data. In Pattern Recognitin in Computational Molecular Biology: TECHNIQUES AND APPROACHES International, pp. 335-345 : Wiley. [ISBN : 978-1-118-89368-5] []. Google Search
Aanya Parasher, Tiratha Raj Singh (2015). Systems neuroscience. In Systems Biology and In-Depth Applications for Unlocking Diseases pp. - UK: Academic Press. [ISBN : 978-0-443-22326-6] [SCOPUS ]. Google Search
Tiratha Raj Singh (2015). Mitogenomics: Mitochondrial Gene Rearrangements, its Implications and Applications. In Agriculture Bioinformatics pp. 259-269 New Delhi: New India Publishing Agency. [ISBN : 9789383305421] []. Google Search
Tiratha Raj Singh (2014). Machine Learning with Special Emphasis on Support Vector Machines (SVMs) in Systems Biology: A Plant Perspective. In Agricultural Bioinformatics pp. 273-281 New Delhi: Springer India. [ISBN : 978-81-322-1879-1] [SCOPUS ]. Google Search

Journal(s) :

Arvind Kumar Yadav, TP Krishna Murthy, Prasanna Vijayarengamani, Rohit Shukla, Shishira S Nair, Ramya Pattabiraman, Sriraksha Prakash, Nimsha Kamala, Durga Prasad, Tiratha Raj Singh (2025). Computational screening and identification of functional deleterious nsSNPs in the Human MAOB Gene. In Silico Research in Biomedicine, 1 (2025), pp. 100135-, DOI: https://doi.org/10.1016/j.insi.2025.100135 [SCOPUS , UGC Care ]. Google Citation
Vidushi Agnihotri, Tiratha Raj Singh (2025). MTBPred: Microtubule-associated and binding proteins predictor for neurodegenerative disorders. Brain Network Disorders, In Press (online), pp. -, DOI: 10.1016/j.bnd.2025.02.002 [SCOPUS , UGC Care ]. Google Citation
S Birendra Kumar, Aishwarya Girish, Samruddhi Sutar, Suheeth Amberi Premanand, Vrinda Garg, Arvind Kumar Yadav, Rohit Shukla, TP Krishna Murthy, Tiratha Raj Singh (2025). A computational study on structural and functional consequences of nsSNPs in human dopa decarboxylase. Journal of Biomolecular Structure and Dynamics, 43 (5), pp. 2503-2517, DOI: 10.1080/07391102.2023.2301517 [SCOPUS , SCI , UGC Care ]. Google Citation
Tikam Chand Dakal, Mony Thakur, Nancy George, Tiratha Raj Singh, Vinod Yadav, Abhishek Kumar (2025). GTF2I acts as a novel tumor suppressor transcription factor and shows Favorable prognosis in renal cancer. Integrative Biology, 17 (), pp. -, DOI: https://doi.org/10.1093/intbio/zyaf001 [SCOPUS , SCI , UGC Care ]. Google Citation
Rohit Shukla, Tiratha Raj Singh (2024). AlzGenPred - CatBoost-based gene classifier for predicting Alzheimer’s disease using high-throughput sequencing data. Scientific Reports, 14 (), pp. -, DOI: https://doi.org/10.1038/s41598-024-82208-x [SCOPUS , SCI , UGC Care ]. Google Citation
Arvind Kumar Yadav, Pradeep Kumar Gupta, Tiratha Raj Singh (2024). PMTPred: machine-learning-based prediction of protein methyltransferases using the composition of k-spaced amino acid pairs. Molecular Diversity, 28 (4), pp. 2301-2315, DOI: https://doi.org/10.1007/s11030-024-10937-2 [SCOPUS , SCI , UGC Care ]. Google Citation
Arvind Kumar Yadav, T P Krishna Murthy, Gangaraju Divyashri, Durga Prasad N, Sriraksha Prakash, Vijaya Vaishnavi V, Rohit Shukla, Tiratha Raj Singh (2024). Computational screening of pathogenic missense nsSNPs in heme oxygenase 1 (HMOX1) gene and their structural and functional consequences. Journal of Biomolecular Structure and Dynamics, 42 (10), pp. 5072-5091, DOI: 10.1080/07391102.2023.2231553 [SCOPUS , SCI , UGC Care ]. Google Citation
Arvind Kumar Yadav, Tiratha Raj Singh (2024). Computational approach for assessing the involvement of SMYD2 protein in human cancers using TCGA data. Journal of Genetic Engineering and Biotechnology, 21 (1), pp. -, DOI: https://doi.org/10.1186/s43141-023-00594-7 [SCOPUS , SCI , UGC Care ]. Google Citation
S. Birendra Kumar, Aishwarya Girish, Samruddhi Sutar, Suheeth Amberi Premanand, Vrinda Garg, Arvind Kumar Yadav, Rohit Shukla, T. P. Krishna Murthy, Tiratha Raj Singh (2024). A computational study on structural and functional consequences of nsSNPs in human dopa decarboxylase. Journal of Biomolecular Structure and Dynamics, Online (online), pp. 1-10, DOI: 10.1080/07391102.2023.2301517 [SCOPUS , SCI , UGC Care ]. Google Citation
Aishwarya Girish, Samruddhi Sutar, T P Krishna Murthy, Suheeth Amberi Premanand, Vrinda Garg, Lavan Patil, S Shreyas, Rohit Shukla, Arvind Kumar Yadav, Tiratha Raj Singh (2023). Comprehensive bioinformatics analysis of structural and functional consequences of deleterious missense mutations in the human QDPR gene. Journal of Biomolecular Structure and Dynamics, 29 (), pp. 1-17, DOI: 10.1080/07391102.2023.2226740 [SCOPUS , SCI , UGC Care ]. Google Citation
Ankita Singh, Tiratha Raj Singh (2023). Innate and adaptive glial cell responses in Alzheimer’s disease. Exploration of neuroprotective therapy, 3 (2023), pp. 90-104, DOI: https://doi.org/10.37349/ent.2023.00039 []. Google Citation
Rohit Shukla, Anshuman Chandra, Anuj Kumar, Pallavi Kandpal, Himanshu Avashthi, Vijay Kumar Goel, Imteyaz Qamar, Nagendra Singh, David J. Kelvin, Tiratha Raj Singh (2023). Repurposing of drugs against methyltransferase as potential Zika virus therapies. Scientific Reports, 13 (Article number: 7870), pp. 1-15, DOI: 10.1038/s41598-023-33341-6 [SCOPUS , SCI , UGC Care ]. Google Citation
Michel Arnaud Mbock, Raceline Gounoue Kamkumo, Rohit Shukla, William Feudjou Fouatio, Patrick Valère Tsouh Fokou, Florence Ngueguim Tsofack, Clarice Djouwoug Noussi, Rodrigue Fifen, Augustin Ephrem Nkengfack, Tiratha Raj Singh, Bruno Lenta Ndjakou, Norbert Sewald, Fabrice Fekam Boyom, Jean Justin Essia Ngang, Onana Boyomo, Theophile Dimo (2023). Curative anti-typhoid effect of Detarium microcarpum Guill. & Perr.(Leguminosae) hydroethanolic extract root bark based-on in vivo and molecular docking analyses. Journal of Ethnopharmacology, 307 (May 2023), pp. 116209-, DOI: https://doi.org/10.1016/j.jep.2023.116209 [SCOPUS , SCI , UGC Care ]. Google Citation
Rohit Shukla, Anuj Kumar, David J. Kelvin, Tiratha Raj Singh (2023). Disruption of DYRK1A-induced hyperphosphorylation of amyloid-beta and tau protein in Alzheimer’s disease: An integrative molecular modeling approach. Front. Mol. Biosci., 9 (2022), pp. 1-12, DOI: https://doi.org/10.3389/fmolb.2022.1078987 [SCOPUS , SCI , UGC Care ]. Google Citation
T. P. Krishna Murthy, Rohit Shukla, N. Durga Prasad, Praveen Swetha, S. Shreyas, Tiratha Raj Singh, Ramya Pattabiraman, Shishira S. Nair, Blessy B. Mathew, K. M. Kumar (2023). Comprehensive analysis of non-synonymous missense SNPs of human galactose mutarotase (GALM) gene: an integrated computational approach. Journal of Biomolecular Structure and Dynamics, Online (In Press), pp. 1-15, DOI: https://doi.org/10.1080/07391102.2022.2160813 [SCOPUS , SCI , UGC Care ]. Google Citation
Sidharth Saxena, T. P. Krishna Murthy, C. R. Chandrashekhar, Lavan S. Patil, Abhinav Aditya, Rohit Shukla, Arvind Kumar Yadav, Tiratha Raj Singh, Mahesh Samantaray, Amutha Ramaswamy (2022). A bioinformatics approach to the identification of novel deleterious mutations of human TPMT through validated screening and molecular dynamics. Scientific Reports, 12 (Article number: 18872), pp. 1-21, DOI: https://doi.org/10.1038/s41598-022-23488-z [SCOPUS , SCI , UGC Care ]. Google Citation
Garima Sharma, Rohit Shukla, Tiratha Raj Singh (2022). Identification of small molecules against the NMDAR: an insight from virtual screening, density functional theory, free energy landscape and molecular dynamics simulation-based findings. Network Modeling Analysis in Health Informatics and Bioinformatics, 11 (2022), pp. 31-1-31-15, DOI: https://doi.org/10.1007/s13721-022-00374-2 [SCOPUS ]. Google Citation
Swati Krishna, T.P. Krishna Murthy, G. Divyashri, Manikanta Murahari, Rohit Shukla, S. Birendra Kumar, Tiratha Raj Singh (2022). Pharmacoinformatics based screening of combined synthetic and natural compounds to identify novel and in silico potential Bcl-2 inhibitors. Journal of Molecular Liquids, 366 (2022), pp. 1-15, DOI: https://doi.org/10.1016/j.molliq.2022.120250 [SCOPUS , SCI ]. Google Citation
Rohit Shukla, Vidushi Agnihotri, Arvind Kumar Yadav, Tiratha Raj Singh (2022). Bioinformatics: Challenges and Opportunities now and in near future . Academia letters, 1 (2022), pp. 31-35, DOI: https://doi.org/10.20935/AL5910 []. Google Citation
S Saxena, TPK Murthy, V Chandramohan, AK Yadav, Tiratha Raj Singh (2021). Structural and functional analysis of disease-associated mutations in GOT1 gene: An in silico study. Computers in Biology and Medicine, 136 (2021), pp. 104695-, DOI: https://doi.org/10.1016/j.compbiomed.2021.104695 [SCOPUS , SCI ]. Google Citation
Arvind Kumar Yadav, Tiratha Raj Singh (2021). Novel inhibitors design through structural investigations and simulation studies for human PKMTs (SMYD2) involved in cancer. Molecular Simulation, 47 (14), pp. 1149-1158, DOI: 10.1080/08927022.2021.1957882 [SCOPUS , SCI ]. Google Citation
Garima Sharma, Rohit Shukla, Tiratha Raj Singh (2021). Analysis of small molecules against the NMDA receptor: an insight from virtual screening and molecular dynamics simulation based findings. Research Square, (2021), pp. 1-19, DOI: https://doi.org/10.21203/rs.3.rs-568180/v1 []. Google Citation
Rohit Shukla, Tiratha Raj Singh (2021). High-throughput screening of natural compounds and inhibition of a major therapeutic target HsGSK-3β for Alzheimer’s disease using computational approaches. Journal of Genetic Engineering and Biotechnology, 19 (Article number: 61), pp. 1-17, DOI: 10.1186/s43141-021-00163-w [SCOPUS ]. Google Citation
Ankita Shukla, Tiratha Raj Singh (2021). Structure based inference of functional single nucleotide polymorphism and its role in TGFß1 allied colorectal cancer (CRC). International Journal of Bioinformatics Research and Applications, 17 (1), pp. 80-99, DOI: https://doi.org/10.1504/IJBRA.2021.113965 [SCOPUS ]. Google Citation
Arvind Kumar Yadav, Tiratha Raj Singh (2021). Novel structural and functional impact of damaging single nucleotide polymorphisms (SNPs) on human SMYD2 protein using computational approaches. Meta Gene, 28 (2021), pp. 100871-, DOI: https://doi.org/10.1016/j.mgene.2021.100871 [SCOPUS ]. Google Citation
NS Munjal, R Shukla, Tiratha Raj Singh (2021). Physicochemical characterization of paclitaxel prodrugs with cytochrome 3A4 to correlate solubility and bioavailability implementing molecular docking and simulation studies. Journal of Biomolecular Structure and Dynamics, 40 (13), pp. 5983-5995, DOI: 10.1080/07391102.2021.1875881 [SCOPUS , SCI ]. Google Citation
Sadhika Behl, Arushi Sharma, Prashanth Suravajhala, Tiratha Raj Singh (2021). Computational studies to explore the role of MSI associated DNA mismatch repair mechanisms in HNPCC through expression and interaction data. International Journal of Bioinformatics Research and Applications, 16 (4), pp. 408-416, DOI: https://doi.org/10.1504/IJBRA.2020.113023 [SCOPUS ]. Google Citation
Arvind Kumar Yadav, Rohit Shukla, Harish Changotra, Tiratha Raj Singh (2021). Recent challenges and progress of potential vaccines for Coronavirus disease 2019 (COVID-19). International Journal for Computational Biology, 9 (), pp. 7-, DOI: []. Google Citation
Rohit Shukla, Tiratha Raj Singh (2020). Neuroinflammation in Alzheimers Disease: Current Therapeutic Approaches and Recent Progress. Journal of Neurology and Brain Disorders, 4 (5), pp. 403-407, DOI: 10.32474/OJNBD.2020.04.000200 []. Google Citation
Rohit Shukla, Tiratha Raj Singh (2020). Identification of small molecules against cyclin dependent kinase-5 using chemoinformatics approach for Alzheimers disease and other tauopathies. Journal of Biomolecular Structure and Dynamics, 40 (6), pp. 2815-2827, DOI: 10.1080/07391102.2020.1844050 [SCOPUS , SCI ]. Google Citation
Varsha Mehta, Tanya Singh, Ankush Bansal, Tiratha Raj Singh (2020). SCAN DB: an integrated catalogue of computationally characterised NER specific skin cancers . International Journal of Bioinformatics Research and Applications, 16 (3), pp. 245-256, DOI: https://doi.org/10.1504/IJBRA.2020.109099 [SCOPUS ]. Google Citation
Nupur S Munjal, Rohit Sharma, Tiratha Raj Singh (2019). Chemometric approach to estimate kinetic properties of paclitaxel prodrugs and their substructures for solubility prediction through molecular modelling and simulation studies. Journal of Chemometrics, 33 (11), pp. e3181-e3181, DOI: https://doi.org/10.1002/cem.3181 [SCOPUS , SCI ]. Google Citation
Ashwani Kumar, Ankush Bansal, Tiratha Raj Singh (2019). ABCD: Alzheimers disease Biomarkers Comprehensive Database. 3 Biotech, 2019 (9), pp. 351-, DOI: 10.1007%2Fs13205-019-1888-0 [SCOPUS , SCI ]. Google Citation
Rohit Shukla, Tiratha Raj Singh (2019). Virtual screening, pharmacokinetics, molecular dynamics and binding free energy analysis for small natural molecules against cyclin-dependent kinase 5 for Alzheimers disease. Journal of Biomolecular Structure and Dynamics, 38 (1), pp. 248-262, DOI: 10.1080/07391102.2019.1571947. [SCOPUS , SCI ]. Google Citation
Rohit Shukla, Nupur S Munjal, Tiratha Raj Singh (2019). Identification of novel small molecules..for Alzheimer. Journal of Molecular Graphics and Modelling, 91 (2019), pp. 91-104, DOI: https://doi.org/10.1016/j.jmgm.2019.06.008 [SCOPUS , SCI ]. Google Citation
Asati N, Mishra A, Shukla A, Tiratha Raj Singh (2019). Gene Expression Studies to Identify Significant Genes in AR, MTOR, MAPK Pathways and their Overlapping Regulatory Role in Prostate Cancer. Journal of integrative bioinformatics, 16 (3), pp. 1-12, DOI: https://doi.org/10.1515/jib-2018-0080 [SCOPUS ]. Google Citation
Ashwani Kumar, Vineet Mehta, Utkarsh Raj, Pritish Kumar Varadwaj, Udayabanu M, Raghu M. Yennamalli , Tiratha Raj Singh (2019). Computational and In-Vitro Validation of Natural Molecules as Potential Acetylcholinesterase Inhibitors and Neuroprotective Agents. Current Alzheimer Research, 16 (2), pp. 116-127, DOI: 10.2174/1567205016666181212155147 [SCOPUS , SCI , UGC Care ]. Google Citation
Ankush Bansal, Tiratha Raj Singh, Rajinder Singh Chauhan (2018). Publisher Correction: A novel miRNA analysis framework to analyze differential biological networks. Scientific Reports, 8 (2018), pp. 1-, DOI: https://doi.org/10.1038/s41598-017-14973-x [SCOPUS , SCI ]. Google Citation
Partha Sarathi Das, Rajdeep Poddar, Saumyadip Sarkar, MohanKumar Megha, Vijayaraghava Seshadri Sundararajan, Sivaramaiah Nallapeta, Pratap VV Reddy, Jayaraman K Valadi, Pritish Kumar Varadwaj, Tiratha Raj Singh, Prashanth Suravajhala (2018). Twelve years of BIOinformatics CLUb for Experimenting Scientists (Bioclues). PeerJ Preprints, 6 (), pp. e26503v1-, DOI: https://doi.org/10.7287/peerj.preprints.26503v1 []. Google Citation
Rutash Kumar, Ankush Bansal, Rohit Shukla, Tiratha Raj Singh, Pramod Wasudeo Ramteke, Satendra Singh, Budhayash Gautam (2018). In silico screening of deleterious single nucleotide polymorphisms (SNPs) and molecular dynamics simulation of disease associated mutations in gene responsible for Oculocutaneous Albinism type 6 (OCA 6) disorder. Journal of Biomolecular Structure and Dynamics, 37 (13), pp. 3513-3523 , DOI: 10.1080/07391102.2018.1520649 [SCOPUS , SCI ]. Google Citation
Ankita Shukla, Tiratha Raj Singh (2018). Network-based Approach to Understand Dynamic Behaviour of Wnt Signaling Pathway Regulatory Elements in Colorectal Cancer. Network Modeling Analysis in Health Informatics and Bioinformatics, 7 (2018), pp. 1-13, DOI: 10.1007/s13721-018-0175-z [SCOPUS ]. Google Citation
Ankush Bansal, Pulkit Srivastava, Tiratha Raj Singh (2018). An Integrative Approach to Develop Computational Pipeline for Drug-target Interaction Network Analysis. Scientific Reports, 8 (2018), pp. 10238-, DOI: 10.1038/s41598-018-28577-6 [SCOPUS , SCI ]. Google Citation
Nupur S Munjal, Manu Sharma, Tiratha Raj Singh (2018). Development of QSPR Strategy for the Solubility Prediction. Current Computer-Aided Drug Design, 14 (4), pp. 302-309, DOI: DOI:10.2174/1573409914666180713114954 [SCOPUS , SCI ]. Google Citation
PP Panigrahi, R Singla, A Bansal, MC Junior, V Jaitak, Raghu M. Yennamalli , Tiratha Raj Singh (2018). In silico Screening and Molecular Interaction Studies of Tetrahydrocannabinol and its Derivatives with Acetylcholine Binding Protein. Current Chemical Biology, 12 (2), pp. 181-190, DOI: 10.2174/2212796812666180416145232 [SCOPUS ]. Google Citation
Jyoti Thakur, Tiratha Raj Singh (2018). Frame OUT and FrameOUTDB: A web based application and repository for the identification and analysis of frameshift mutations. International Journal for Computational Biology, 7 (1), pp. 35-, DOI: []. Google Citation
Ankita Shukla, Raghu M. Yennamalli , Tiratha Raj Singh (2018). Network and structure based inference of functional single nucleotide polymorphisms associated with the TGFβ1 gene and its role in colorectal cancer (CRC) . Gene Reports, 11 (2018), pp. 131-142, DOI: https://doi.org/10.1016/j.genrep.2018.03.009 [SCOPUS ]. Google Citation
Vineet Mehta, Tiratha Raj Singh, Udayabanu M (2017). Quercetin Ameliorates Chronic Unpredicted Stress-induced Behavioral Dysfunction in Male Swiss Albino Mice by Modulating Hippocampal Insulin Signaling Pathway. Physiology and Behavior, 182 (2017), pp. 10-16, DOI: https://doi.org/10.1016/j.physbeh.2017.09.019 [SCOPUS , SCI ]. Google Citation
Ashwani Kumar, Tiratha Raj Singh (2017). Analysis for Biological Network Properties of Alzheimers Disease Associated Gene Set by Enrichment and Topological Examinations. International Journal of Bioinformatics Research and Applications, 13 (3), pp. 214-222, DOI: 10.1504/IJBRA.2017.10006803 [SCOPUS ]. Google Citation
Ankush Bansal, Tiratha Raj Singh, R.S. Chauhan (2017). A Novel miRNA Analysis Framework to Analyze Differential Biological Networks. Scientific Reports, 7 (2017), pp. 14604-, DOI: 10.1038/s41598-017-14973-x [SCOPUS , SCI ]. Google Citation
Tiratha Raj Singh, Ankita Shukla (2017). Bioinformatics to Systems Biology : A Journey of Knowledge Discovery. CSI Communications, 41 (4), pp. 10-, DOI: []. Google Citation
Sampan Attri, Niharika Singh, Tiratha Raj Singh, Gunjan Goel (2017). Effect of in vitro gastric and pancreatic digestion on antioxidant potential of fruit juices. Food Bioscience, 17 (2017), pp. 1-6, DOI: http://dx.doi.org/10.1016/j.fbio.2016.10.003 [SCOPUS , SCI ]. Google Citation
Ashwani Kumar, Tiratha Raj Singh (2017). A New Decision Tree to Solve the Puzzle of Alzheimers Disease Pathogenesis Through Standard Diagnosis Scoring System. Interdisciplinary sciences, computational life sciences, 9 (2017), pp. 107-115, DOI: 10.1007/s12539-016-0144-0 [SCOPUS , SCI ]. Google Citation
Mehta V, Parashar A, Sharma A, Tiratha Raj Singh, Udayabanu M (2017). Quercetin Ameliorates Chronic Unpredicted Stress-mediated Memory Dysfunction in Male Swiss Albino Mice by Attenuating Insulin Resistance and Elevating Hippocampal GLUT4 Levels Independent of Insulin Receptor Expression.. Hormones and Behavior, 89 (2017), pp. 13-22, DOI: https://doi.org/10.1016/j.yhbeh.2016.12.012 [SCOPUS , SCI , UGC Care ]. Google Citation
Ahmed Moussa, Brigitte Vannier, Raghu M. Yennamalli , Tiratha Raj Singh (2016). Recent Trends and Developments in Bioinformatics: Challenges and Opportunities. CSI Communications, 40 (7), pp. 28-, DOI: []. Google Citation
Ankita Shukla, Ahmed Moussa, Tiratha Raj Singh (2016). DREMECELS: A Curated Database for Base Excision and Mismatch Repair Mechanisms Associated Human Malignancies. PLoS ONE, 11 (6), pp. 1-8, DOI: https://doi.org/10.1371/journal.pone.0157031 [SCOPUS , SCI ]. Google Citation
Manika Sehgal, Rajinder Gupta, Ahmed Moussa, Tiratha Raj Singh (2016). An Integrative Approach for Mapping Differentially Expressed Genes and Network Components Using Novel Parameters to Elucidate Key Regulatory Genes in Colorectal Cancer. PLoS ONE, 10 (7), pp. 1-18, DOI: https://doi.org/10.1371/journal.pone.0133901 [SCOPUS , SCI ]. Google Citation
Prashanth Survajhala, Tiratha Raj Singh (2015). Is HNF4A a Candidate to Study Zinc Finger Protein Slug?. International Journal of Bioinformatics Research and Applications, 11 (4), pp. 366-373, DOI: 10.1504/IJBRA.2015.070141 [SCOPUS ]. Google Citation
Varun Kumar, Tiratha Raj Singh, Alkesh Hada, Monica Jolly, Andy Ganapathi, Archana Sachdev (2015). Probing Phosphorus Efficient Low Phytic Acid Content Soybean Genotypes with Phosphorus Starvation in Hydroponics Growth System. Applied Biochemistry and Biotechnology, 177 (2015), pp. 689-699, DOI: 10.1007/s12010-015-1773-1 [SCOPUS , SCI ]. Google Citation
Varun Kumar, Neha Sharma, Kirti Shitiz, Tiratha Raj Singh, Chanderdeep Tandon, Hemant Sood, Rajinder S. Chauhan (2015). An insight into conflux of metabolic traffic leading to picroside-I biosynthesis by tracking molecular time course changes in a medicinal herb, Picrorhiza kurroa. Plant Cell, Tissue and Organ Culture, 123 (2015), pp. 435-441, DOI: 10.1007/s11240-015-0839-7 [SCOPUS , SCI ]. Google Citation
Jibesh Kumar Padhan, Varun Kumar, Hemant Sood, Tiratha Raj Singh, Rajinder S. Chauhan (2015). Contents of therapeutic metabolites in Swertia chirayita correlate with the expression profiles of multiple genes in corresponding biosynthesis pathways. Phytochemistry, 116 (2015), pp. 38-47, DOI: 10.1016/j.phytochem.2015.05.007 [SCOPUS , SCI ]. Google Citation
Ankita Shukla, Manika Sehgal, Tiratha Raj Singh (2015). Hydroxymethylation and its potential implication in DNA repair system: A review and future perspectives. Gene, 564 (2), pp. 109-118, DOI: https://doi.org/10.1016/j.gene.2015.03.075 [SCOPUS , SCI ]. Google Citation
Sarra Hamzaoui, Smail Bouzergane, Tiratha Raj Singh, Hassan Badir, Ahmed Moussa (2015). Analysis of Mass Spectrometry data: Significance Analysis of Microarrays for SELDI-MS Data in Proteomics. International Journal for Computational Biology, 4 (1), pp. 5-, DOI: []. Google Citation
Ira Vashisht, Prashant Mishra, Tarun Pal, Sreekrishna Chanumolu, Tiratha Raj Singh, Rajinder S. Chauhan (2015). Mining NGS transcriptomes for miRNAs and dissecting their role in regulating growth, development, and secondary metabolites production in different organs of a medicinal herb, Picrorhiza kurroa.. Planta, 41 (2015), pp. 1255-1268, DOI: 10.1007/s00425-015-2255-y [SCOPUS , SCI ]. Google Citation
Rohit Randhawa, Manika Sehgal, Tiratha Raj Singh, Ajay Duseja, Harish Changotra (2015). Unc-51 like kinase 1 (ULK1) in silico analysis for biomarker identification: A vital component of autophagy. Gene, 562 (1), pp. 40-49, DOI: 10.1016/j.gene.2015.02.056 [SCOPUS , SCI ]. Google Citation
Manika Sehgal, Tiratha Raj Singh (2014). Computational Approach for the Identification of Plausible Biomarkers from Composite Networks and Gene Expression data Associated with Colorectal Cancer. International Journal of Basic and Applied Biology, 1 (1), pp. 62-64, DOI: []. Google Citation
Nikhil Malhotra, Varun Kumar, Hemant Sood, Tiratha Raj Singh, Rajinder S. Chauhan (2014). Multiple genes of mevalonate and non-mevalonate pathways contribute to high aconites content in an endangered medicinal herb, Aconitum heterophyllum Wall. Phytochemistry, 108 (2014), pp. 26-34, DOI: https://doi.org/10.1016/j.phytochem.2014.08.025 [SCOPUS , SCI ]. Google Citation
Ashwani Kumar, Abhay Pratap, Urvashi Udar, Rajinder S. Chauhan, Tiratha Raj Singh (2014). SMDB: Soybean Marker DataBase. International Journal for Computational Biology, 3 (2), pp. 44-, DOI: []. Google Citation
Eric Nimpaye, Ouafae Kaissi, Tiratha Raj Singh, Brigitte Vannier, Azeddine Ibrahimi, Ahmed Moussa (2014). MatSAM: a Matlab implementation for Significance Analysis of Microarrays. International Journal for Computational Biology, 3 (2), pp. 49-, DOI: []. Google Citation
Meethanshu Mittal, Rahul Singh, Tiratha Raj Singh (2014). Prediction of ligand binding sites in RNA binding protein pockets using Support Vector Machines. Journal of Biomedical Sciences, 3 (1), pp. 1-7, DOI: []. Google Citation
Praharshit Sharma, Bhupendra Kr Pathak, Tiratha Raj Singh (2014). A mathematical model of central dogma of molecular biology employing a novel irrational- integral-imaginary (i3) encoding and numerical approximation based on cellular automaton. International Journal for Computational Biology, 3 (1), pp. 27-, DOI: []. Google Citation
Arun Gupta, Sharat Chandra, Tiratha Raj Singh (2014). HLAB27Pred: SVM-based precise method for predicting HLA-B*2705 binding peptides in antigenic sequences. Network Modeling Analysis in Health Informatics and Bioinformatics, 3 (2014), pp. 1-6, DOI: 10.1007/s13721-014-0056-z [SCOPUS ]. Google Citation
Manika Sehgal, Tiratha Raj Singh (2014). Systems biology approach for mutational and site-specific structural investigation of DNA repair genes for xeroderma pigmentosum. Gene, 543 (1), pp. 108-117, DOI: https://doi.org/10.1016/j.gene.2014.03.057 [SCOPUS , SCI ]. Google Citation
Abhik Seal, Arun Gupta, M. Mahalaxmi, Riju Aykkal, Tiratha Raj Singh, Vadivel Arunachalam (2014). Tools, resources and databases for SNPs and indels in sequences: A review. International Journal of Bioinformatics Research and Applications, 10 (3), pp. 264-296, DOI: 10.1504/IJBRA.2014.060762 [SCOPUS ]. Google Citation
Abhay Pratap, Setu Taliyan, Tiratha Raj Singh (2014). NMDB: Network Motif Database Envisaged and Explicated from Human Disease Specific Pathways. Journal of Biological Systems, 22 (1), pp. 89-100, DOI: https://doi.org/10.1142/S0218339014500053 [SCOPUS , SCI ]. Google Citation
Manika Sehgal, Tiratha Raj Singh (2014). DR-GAS: A database of functional genetic variants and their phosphorylation states in human DNA repair systems. DNA Repair, 14 (2014), pp. 97-103, DOI: http://dx.doi.org/10.1016/j.dnarep.2014.01.004 [SCOPUS , SCI , UGC Care ]. Google Citation
Tiratha Raj Singh, Arun Gupta, Aykkal Riju, M. Mahalaxmi, Abhik Seal, V. Arunachalam (2013). Computational identification and analysis of single-nucleotide polymorphisms and insertions/deletions in expressed sequence tag data of Eucalyptus. Journal of Genetics, 92 (2014), pp. 34-38, DOI: 10.1007/s12041-011-0052-3 [SCOPUS , SCI ]. Google Citation
Tiratha Raj Singh, Arun Gupta, Prashanth Suravajhala (2013). Challenges in the miRNA research. International Journal of Bioinformatics Research and Applications, 9 (6), pp. 576-583, DOI: https://doi.org/10.1504/IJBRA.2013.056620 [SCOPUS ]. Google Citation
Tiratha Raj Singh (2013). Mitochondrial Genomes and Frameshift Mutations: Hidden Stop Codons, their Functional Consequences and Disease Associations. International Journal of Genomic Medicine, 1 (1), pp. 1-7, DOI: 10.4172/2332-0672.1000108 []. Google Citation
Ouafae Kaissi, Eric Nimpaye, Tiratha Raj Singh, Brigitte Vannier, Azeddine Ibrahimi, Abdellatif Amrani Ghacham, Ahmed Moussa (2013). Genes Selection Comparative Study in Microarray Data Analysis. Bioinformation, 9 (20), pp. 1019-, DOI: 10.6026/97320630091019 []. Google Citation
Panigrahi P.P., Tiratha Raj Singh (2013). Computational studies on Alzheimers disease associated pathways and regulatory patterns using microarray gene expression and network data: Revealed association with aging and other diseases. Journal of Theoretical Biology, 334 (2013), pp. 109-121, DOI: https://doi.org/10.1016/j.jtbi.2013.06.013 [SCOPUS , SCI ]. Google Citation
Pooja Kaushik, Chakresh Kumar Jain, Reema Gabrani, Tiratha Raj Singh (2013). Study on variability assessment and evolutionary relationships of glutamate racemase in Pseudomonas species. Interdisciplinary sciences, computational life sciences, 5 (2013), pp. 247-257, DOI: 10.1007/s12539-013-0181-x [SCOPUS , SCI ]. Google Citation
Gupta A., Tiratha Raj Singh (2013). SHIFT: Server for hidden stops analysis in frame-shifted translation. BMC Research Notes, 6 (Article number: 68), pp. 68-74, DOI: 10.1186/1756-0500-6-68 [SCOPUS ]. Google Citation
Ashwani Kumar, Tiratha Raj Singh (2013). A quantitative study of gene regulatory pathways in Bacillus subtilis for virulence and competence phenotype by quorum sensing. Systems and Synthetic Biology, 7 (1-2), pp. 33-39, DOI: https://doi.org/10.1007/s11693-013-9105-7 [SCOPUS ]. Google Citation
Manika Sehgal, Tiratha Raj Singh (2012). Identification and analysis of biomarkers for mismatch repair proteins: A bioinformatic approach. Journal of Natural Science, Biology and Medicine, 3 (2), pp. 139-146, DOI: 10.4103/0976-9668.101887 [SCOPUS ]. Google Citation
Priya P. Panigrihi, Tiratha Raj Singh (2012). Computational analysis for functional and evolutionary aspects of BACE-1 and associated Alzheimer related proteins. International Journal of Computational Intelligence Studies, 1 (4), pp. 322-332, DOI: 10.1504/IJCISTUDIES.2012.050355 []. Google Citation
Digvijay Singh Chauhan, Sharat Chandra, Arun Gupta, Tiratha Raj Singh (2012). Molecular modelling, docking and interaction studies of Human-plasmogen and Salmonella-enolase with enolase inhibitors. Bioinformation, 8 (4), pp. 185-188, DOI: 10.6026/97320630008185 []. Google Citation
Sharat Chandra, Tiratha Raj Singh (2012). Linear B-cell epitopes prediction for epitope vaccine design against meningococcal disease and their computational validations through physicochemical properties. Network Modeling Analysis in Health Informatics and Bioinformatics, 1 (2012), pp. 153-159, DOI: 10.1007/s13721-012-0019-1 [SCOPUS ]. Google Citation
Arun Gupta, Dinesh Chaukiker, Tiratha Raj Singh (2011). Comparative analysis of computational epitope predictions: proposed library of putative vaccine candidates for HIV. Bioinformation, 5 (9), pp. 386-389, DOI: 10.6026/97320630005386 []. Google Citation
Tiratha Raj Singh (2011). Phylogenetic Networks: Concepts, Algorithms and Applications. Current Science, 100 (10), pp. 1570-1571, DOI: [SCOPUS , SCI ]. Google Citation
Sharat Chandra, Digvijay Singh, Tiratha Raj Singh (2010). Prediction and characterization of T-cell epitopes for epitope vaccine design from outer membrane protein of Neisseria meningitidis serogroup B. Bioinformation, 5 (4), pp. 155-161, DOI: 10.6026/97320630005155 []. Google Citation

Conference(s) :

Devansh Kalia, Tiratha Raj Singh (2025). Asthma and Chronic Obstructive Pulmonary Disease (COPD) Prediction Using PEEP Expiratory Occlusion Data: A Hybrid Approach with Random Forest and Feedforward Neural Network. Proceedings of the International Conference on Signal Processing, Computing and Control (ISPCC) [7th : JUIT, Solan : 6-8 March, 2025], pp.539-544. [SCOPUS]. Google Citation
Naman Pratap Singh, Tiratha Raj Singh (2025). Parallel Processing of Gene Expression Data to Identify Potential Genes Involved in the Progression of Breast Cancer. Proceedings of the 2024 Eighth International Conference on Parallel, Distributed and Grid Computing (PDGC) [8th : JUIT, Solan : 18-20 December, 2024], pp.377-382. [SCOPUS]. Google Citation
Ajay Kumar, Simran Rai, Tiyasha De, Rohit Shukla, Tiratha Raj Singh (2022). Structural and functional level of mutational analysis of TREM2 Gene to study its role in Alzheimer’s disease. Proceedings of the ICGAMS, 2022 [9th : PCCOE, Pune, India : 29 Sept.- 01 Oct., 2022], pp.70-. [SCOPUS]. Google Citation
Tiyasha De, Simran Rai, Ajay Kumar, Rohit Shukla, Tiratha Raj Singh (2022). Computational investigations of Alzheimer ’s disease related pathways with special relevance to DNA repair and autophagy. Proceedings of the ICGAMS, 2022 [9th : PCCOE, Pune, India : 29 Sept., 01 Oct., 2022], pp.-.. Google Citation
Simran Rai, Tiyasha De, Ajay Kumar, Rohit Shukla, Tiratha Raj Singh (2022). Structural and Functional level Mutational investigations of SERPINI1 gene to explore its role in Alzheimer’s disease. Proceedings of the ICGAMS, 2022 [9th : PCCOE, Pune, India : 29 Sept., 01 Oct., 2022], pp.-.. Google Citation
Rohit Shukla, Tiratha Raj Singh (2022). Classification of Alzheimer’s Disease-associated genes using machine learning techniques. Proceedings of the [9th : PCCOE, Pune, India : 29 Sept., 01 Oct., 2022], pp.-.. Google Citation
Tiyasha De, Rohit Shukla, Tiratha Raj Singh (2022). Computational investigation of Alzheimers Disease related pathways with special relevance to DNA repair and autophagy. Proceedings of the Proceedings of the ICABB-2022 [ : 20 - 22, January, 2022], pp.-.. Google Citation
Arvind Kumar Yadav, Pradeep Kumar Gupta, Tiratha Raj Singh (2022). A multi-omics analysis to reveal the significance correlation of SMYD2 with different cancers using TCGA dataset. Proceedings of the ICABB-2022 [Noida : 20-22, January, 2022], pp.-.. Google Citation
Muskan Kapoor, Mehak Kapoor, Rohit Shukla, Tiratha Raj Singh (2021). Early Diagnosis of Alzheimer's Disease using Machine Learning Based Methods. Proceedings of the International Conference on Contemporary Computing (IC3-2021) [13th : Noida, India : 05-07 August, 2021], pp.70-76.. Google Citation
Rohit Shukla, Tiratha Raj Singh (2021). Identification of AD associated genes using machine learning techniques. Proceedings of the Indian Conference on Bioinformatics (InBix2021) [CSIR North East Institute of Science and Technology, Jorhat, Assam : 11-13 Nov., 2021], pp.30-31-.. Google Citation
Rohit Shukla, Tiratha Raj Singh (2019). Identification of natural multi-target inhibitors for Alzheimer�s disease using polypharmacology approach. Proceedings of the International Conference on Recent Trends in Biotechnology and Bioinformatics (ICBAB) [JUIT, Solan, India : August 01-03, 2019], pp.-.. Google Citation
Rohit Shukla, Tiratha Raj Singh (2019). Structure-based virtual screening for the identification of novel natural inhibitors of Homo Sapiens Cyclin Dependent Kinase 5 against Alzheimer�s disease. Proceedings of the International Conference on Advances in Biosciences and Biotechnology [JIIT, Noida : 31st January to 2nd February 2019], pp.-.. Google Citation
Siddhant Kalra, Tiratha Raj Singh (2019). MAD: a system level computational enrichment analysis of mitochondria associated genes in Alzheimers disease. Proceedings of the International Conference on Recent Trend in Biotechnology and Bioinformatics (ICBAB- 2019), [JUIT Waknaghat, Solan, India : 01-03, August 2019], pp.-.. Google Citation
Chadia Ed-driouch, Tiratha Raj Singh, Ahmed Moussa (2019). Transcriptomics Data: Study on Gene Selection Methods. Proceedings of the International Conference on Recent Trend in Biotechnology and Bioinformatics (ICBAB- 2019) [JUIT Waknaghat : 01-03 August 2019], pp.-.. Google Citation
Rohit Shukla, Narendra Kumar, Tiratha Raj Singh (2019). Disruption of plaques and tangles formation by targeting multiple enzymes using polypharmacology approach. Proceedings of the National Biomedical Research Competition (NBRCom-2019) [2nd : PGIMER, Chandigarh : 17th Nov., 2019], pp.32-.. Google Citation
Tiratha Raj Singh (2019). Docking studies of Paclitaxel and Paclitaxel prodrgs with CYP enzymes to correlate solubility and bioavailability. Proceedings of the Indian Conference on Bioinformatics (Inbix), 2019 [HMV, Jalandhar, India : Feb., 22-23, 2019], pp.-.. Google Citation
Rohit Shukla, Tiratha Raj Singh (2018). Structure-based virtual screening of natural compounds and inhibition of HsCDK5, an essential enzyme for the phosphorylation of microtubule-associated binding protein. Proceedings of the Himachal Pradesh Science Congress [3rd : IIT Mandi : 22-23 Oct., 2018], pp.-.. Google Citation
Ankush Bansal, Shweta Parmar, Shorya Singh, Rohit Shukla, Tiratha Raj Singh (2018). Big data analytics inference for precision medicine to decipher regulatory interactions in lung cancer. Proceedings of the Himachal Pradesh Science Congress (HPSC) 2018 [3rd : Indian Institute of Technology (IIT) Mandi, Himachal Pradesh, India : Oct., 22-23, 2018], pp.-.. Google Citation
Sadhika Behl, Arushi Sharma, Tiratha Raj Singh (2017). Computational analysis of expression and interaction data to reveal role of DNA Mismatch Repair in MSI and HNPCC. Proceedings of the Inbix 17: Indian Conference on Bioinformatics 2017 [Birla Institute of Scientific Research, Jaipur, India : Nov. 7-9, 2017], pp.-.. Google Citation
Siddhant Kalra, Ankush Bansal, Tiratha Raj Singh (2017). Computational enrichment of Alzheimer associated human mitochondrial genes using comparative expression analysis approach. Proceedings of the Inbix 17: Indian Conference on Bioinformatics 2017 [Birla Institute of Scientific Research, Jaipur : Nov. 7-9, 2017], pp.-.. Google Citation
Ankita Shukla, Ragothaman M. Yennamalli, Tiratha Raj Singh (2017). Structure Based Inference of Functional Single Nucleotide Polymorphism L28F and to Determine its Role in TGFbeta1 Allied Colorectal Cancer (CRC). Proceedings of the Inbix 17: Indian Conference on Bioinformatics 2017 [Birla Institute of Scientific Research, Jaipur : Nov. 7-9, 2017], pp.-.. Google Citation
Ankush Bansal, Anil Kant Thakur, Tiratha Raj Singh (2017). A network analysis framework to decipher uni-directional information flow from differential transcriptome datasets for pathway of interest. Proceedings of the Indian Conference on Bioinformatics (Inbix�17) [Birla Institute of Scientific Research, Jaipur : Nov. 7-9, 2017], pp.-.. Google Citation
Manika Sehgal, Tiratha Raj Singh (2016). An integrated In-Silico Approach for Unraveling Prominence of Human DNA Repair System in Carcinogenesis. Proceedings of the NSCSB-2016 [JUIT, Solan, India : March 18-20, 2016], pp.33-.. Google Citation
Ashwani Kumar, Ankush Bansal, Ajay Sharma Dharmani, Uttara Shankar, Amrita Budhiraja, Tiratha Raj Singh (2016). ABCD: Alzheimer�s Disease Biomarkers Comprehensive Database. Proceedings of the NSCSB-2016 [JUIT, Solan, India : March 18-20, 2016], pp.41-.. Google Citation
Agam Kanodia, Parveen Kaur Thakur, Tanvi Katoch, Shubhangi Kaushik, Ankita Shukla, Tiratha Raj Singh (2016). Network Topology Studies on TGFB Signaling Pathway in Colorectal Cancer. Proceedings of the NSCSB-2016 [JUIT, Solan, India : March 18-20, 2016], pp.43-.. Google Citation
Siddharth S. Tomar, Ivo Kwee, Tiratha Raj Singh (2016). Evaluation of Short Read GPU Based Aligners. Proceedings of the NSCSB-2016 [JUIT, Solan, India : March 18-20, 2016], pp.35-.. Google Citation
Ashwani kumar, Tiratha Raj Singh (2016). System Biology Approach for Gene Set Enrichment and Topological Analysis of AD. Proceedings of the International Conference on Bioinformatics and Systems biology(BSB)-2016 [IIIT-A, Allahabad, India : 4 - 6 March, 2016], pp.-.. Google Citation
Vineet Mehta, Ashwani Kumar, Tiratha Raj Singh, Udayabanu M (2015). Screening of herbal molecules against type 2 diabetes mediated memory dysfunction. Proceedings of the Annual Conference of Indian Academy of neurosciences (IAN)-2015 [Panjab University, Chandigarh, India : Oct., 31-Nov., 02, 2015], pp.36-37-.. Google Citation
Ashwani Kumar, Utkarsh Raj, Pritish Kumar Varadwaj, Tiratha Raj Singh (2015). Flexible docking and simulation studies of herbal compounds as Acetylcholinesterase inhibitor(AChEI) for Alzheimers disease. Proceedings of the National Conference on Bioinformatics Panorama in Agriculture and Health [SHIATS, Allahabad, India : 5-6 October 2015], pp.-.. Google Citation
Ashwani kumar, Vineet mehta, Utkarsh Raj, Pritish Kr. Varadwaj, Udayabanu M, Tiratha Raj Singh (2015). Insights From Docking And Molecular Dynamic Simulation of Acetyl cholinesterase Inhibitors (AChEI) Structural Model For Possible Therapeutic Of Alzheimers Disease(AD) . Proceedings of the Annual Conference of Indian Academy of neurosciences (IAN)-2015, [Panjab University, Chandigarh, India : October 31 - November 2, 2015 ], pp.-.. Google Citation
Ankita Shukla, Ashwani Kumar, Manika Sehgal, Tiratha Raj Singh (2015). Modeling and Simulation of Colorectal Cancer Pathways : An Insight into Regulatory Elements and Biological Processes. Proceedings of the Annual International Conference on Advances in Biotechnology [5th : Kanpur, India : 13-15 March 2015], pp.85-.. Google Citation
Manika Sehgal, Tiratha Raj Singh (2014). Bioinformatics applications to resolve the mystery of diseases associated with Human DNA repair system. Proceedings of the Annual Conference of Indian Association of Biomedical Scientists [35 : Palampur, India : 14-16 July 2014], pp.39-.. Google Citation
Ankita Shukla, Manika Sehgal, Tiratha Raj Singh (2014). Hydroxymethylation and its Role in DNA Repair Associated Disease. Proceedings of the International Conference on Life Sciences, Informatics, Food and Environment [Noida, India : 29-30, August 2014], pp.-.. Google Citation
Manika Sehgal, Ankita Shukla, Tiratha Raj Singh (2014). Functional Enrichment of Pathways Implicated in DNA Repair using Top Down Approach. Proceedings of the International Conference on Life Sciences, Informatics, Food and Environment [Noida, India : 29-30, August 2014], pp.180-.. Google Citation
Manika Sehgal, Tiratha Raj Singh (2014). Computational Approach for the Identification of Plausible Biomarkers from Composite Networks and Gene Expression data Associated with Colorectal Cancer. Proceedings of the World Congress on Stem Cell Research, Cancer Biology and Applied Biotechnology [New Delhi, India : 3-4, May 2014], pp.140-.. Google Citation
Ashwani kumar, Abhay Pratap, Urvashi, Rajinder S. Chauhan, Tiratha Raj Singh (2013). SMDB: Soybean Marker Database. Proceedings of the IFIP International Conference of Bioinformatics [3rd : Bhopal, India : 23-26 September, 2013], pp.99-.. Google Citation
Gurnoor Singh, Tanya Singhania, Arun Gupta, Tiratha Raj Singh (2013). SHIFTDB: database of hidden stop codons in frame-shifted translation in mitochondrial genomic sequences. Proceedings of the Joint 21st Annual International Conference on Intelligent Systems for Molecular Biology (ISMB) and 12th European Conference on Computational Biology (ECCB) 2013 [21 : Berlin, Germany : 21-23, July, 2013], pp.-.. Google Citation
Ankit Gupta, Gautam Mehta, Priya P. Panigrahi, Ahmed Moussa, Tiratha Raj Singh (2013). MiND: web repository for Mitochondrial and Neurological associated human Disease. Proceedings of the SCB Africa ASCBC Conference [Morocco : 13-15 March 2013], pp.-.. Google Citation
Manika Sehgal, Tiratha Raj Singh (2013). Quantitative Genetic Analysis of DNA Repair Genes Implicated in Xeroderma Pigmentosum. Proceedings of the International Federation for Information Processing (IFIP), International Conference on Bioinformatics [3rd : Bhopal, India : 23-26 September 2013], pp.31-.. Google Citation
Digvijay Singh Chauhan, Das A., Panigrahi P.P., Tiratha Raj Singh (2012). Development of early phase diagnostics for Alzheimers disease: use of diabetes mellitus as surrogate biomarker. Proceedings of the InCoB [Thailand, Bangkok : 3-5 October 2012], pp.-.. Google Citation
Digvijay Singh Chauhan, Tiratha Raj Singh (2012). Chaos as positive and negative adaptation (Abstract). Proceedings of the InCoB [Thailand, Bangkok : 3-5 October 2012], pp.-.. Google Citation
Manika Sehgal, Tiratha Raj Singh (2011). Identification and analysis of biomarkers for mismatch repair proteins: A bioinformatic approach. Proceedings of the The International Interdisciplinary Science Conference on Bioinformatics: An interface between Computer Science and Biology [New Delhi, INDIA : 15-17, November 2011], pp.38-.. Google Citation
Singhania T., Singh G., Gupta A., Tiratha Raj Singh (2011). DoMoS: Domain and Motif Server for Functional Information. Proceedings of the IFIP International Conference [IInd : Goa : Sept. 22-25], pp.-.. Google Citation
Bhargava P., Gupta M. Gupta A., Tiratha Raj Singh (2011). WebGenPro: a Web Server for Genomic and Proteomic Analysis. Proceedings of the IFIP International Conference [IInd : Goa : Sept. 22-25], pp.-.. Google Citation
Priya P.P., Tiratha Raj Singh (2011). Functional annotation of Alzheimers related proteins through protein-protein interactions and other in silico methods. Proceedings of the IFIP International Conference [2 : Goa : Sept. 22-25], pp.-.. Google Citation

Biotechnology and Bioinformatics

FACULTY NAMES